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MetaMine: A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes. |
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MetaLook:MetaLook is a Java-based software tool for marine ecological genomics. It offers a three dimensional environment for visualisation and data-mining of DNA sequence information (genomes, metagenomes) in a geographical and ecological context. |
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JCoast: A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes. |
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TETRA: A web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences. |
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MADA: A microarray data analyzing tool, focusing on usability and calculation transparency. It provides a conceptual and well documented step-by-step access to the analyzing process. |
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RibAlign: A tool for those interested in phylogenetic reconstructions based on concatenated ribosomal protein sequences of Bacteria. It provides a fast and scalable database that has been specifically adapted to ribosomal protein sequences. |
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MicHanThi: Automated prediction of gene functions |
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MetaBar: The tool for Consistent Contextual Data Acquisition
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TaxSOM: A bioinformatic tool for taxonomic classification of (meta-)genomic DNA-fragements based on taxon-specific DNA-base composition characteristics using Self-Organizing Maps. |
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CDinFusion: A submission-preparation-tool for the integration of contextual data (CD) with sequence data. |