genomes
overview
Browse genomes by isolation enviroment
Click a Location to retrieve environmental data
We manually annotate the genome collection with EnvO-Lite terms to offer users further comparative perspectives. The tag-cloud below can be used to sort genomes by EnvO-Lite annotations. Clicking on coordinates in the "Location" column will access environmental data via our mapserver. See our Annotation Overview for more details.
Please note that "marine habitat" refers to marine water!
unclassified (11) air (1) animal-associated habitat (876) aquatic habitat (43) cultured habitat (38) extreme habitat (21) food (62) freshwater habitat (28) hot spring (61) hydrothermal vent (27) marine habitat (227) organism-associated habitat (21) plant-associated habitat (90) sediment (85) sludge (17) soil (171) terrestrial habitat (42) waste water (12)
| Organism Name | Location | Depth | Date Sampled | EnvO-Lite | TaxID | Genome PID |
|---|---|---|---|---|---|---|
| Legionella longbeachae | NA | NA | NA | soil | 450 | 16090 |
| Kocuria rhizophila DC2201 | NA | NA | NA | soil | 378753 | 27833 |
| Bdellovibrio bacteriovorus HD100 | NA | NA | NA | soil | 264462 | 9637 |
| Yersinia pestis Nepa1516A | NA | NA | NA | soil | 377628 | 30503 |
| Clostridium botulinum type G | NA | NA | NA | soil | 447213 | 20021 |
| Burkholderia multivorans ATCC 17616 | NA | NA | NA | soil | 395019 | 19401 |
| Collimonas fungivorans | NA | NA | NA | soil | 158899 | 16085 |
| Verrucomicrobium spinosum DSM 4136 | NA | NA | NA | soil | 240016 | 10620 |
| Cupriavidus necator JMP134 | NA | NA | NA | soil | 264198 | 10646 |
| Rubrobacter xylanophilus DSM 9941 | NA | NA | NA | soil | 266117 | 10670 |
| Burkholderia sp. 383 (R18194) | NA | NA | NA | soil | 269483 | 10695 |
| Burkholderia thailandensis E264 | NA | NA | NA | soil | 271848 | 10774 |
| Bacillus anthracis Ames Ancestor A2084 (0581) | NA | NA | NA | soil | 261594 | 10784 |
| Bacillus anthracis A1055 (Group C) | NA | NA | NA | soil | 280355 | 10795 |
| Bacillus anthracis CNEVA-9066 (GT79 Group B2) | NA | NA | NA | soil | 280354 | 10796 |
| Bacillus anthracis Vollum (GT77 Group A4) | NA | NA | NA | soil | 261591 | 10797 |
| Bacillus anthracis Australia 94 (GT55, Group A3a) | NA | NA | NA | soil | 280477 | 10799 |
| Pseudomonas fluorescens PfO-1 | NA | NA | NA | soil | 205922 | 12 |
| Bacillus licheniformis ATCC 14580 | NA | NA | NA | soil | 279010 | 12388 |
| Arthrobacter aurescens TC1 | NA | NA | NA | soil | 290340 | 12512 |
| Anaeromyxobacter dehalogenans 2CP-C | NA | NA | NA | soil | 290397 | 12634 |
| Clostridium beijerinckii NCIMB 8052 | NA | NA | NA | soil | 290402 | 12637 |
| Solibacter usitatus Ellin6076 | NA | NA | NA | soil | 234267 | 12638 |
| Arthrobacter sp. FB24 | NA | NA | NA | soil | 290399 | 12640 |
| Nocardioides sp. JS614 | NA | NA | NA | soil | 196162 | 12738 |
| Streptomyces scabiei 87-22 | NA | NA | NA | soil | 1930 | 12985 |
| Ralstonia solanacearum GMI1000 | NA | NA | NA | soil | 267608 | 13 |
| Anaerobranca gottschalkii AZ 13040/09 | NA | NA | NA | soil | 108328 | 13007 |
| Paracoccus denitrificans PD1222 | NA | NA | NA | soil | 318586 | 13020 |
| Thiobacillus denitrificans ATCC 25259 | NA | NA | NA | soil | 292415 | 13025 |
| Heliobacillus mobilis | NA | NA | NA | soil | 28064 | 13236 |
| Bacillus clausii KSM-K16 | NA | NA | NA | soil | 66692 | 13291 |
| Bacillus amyloliquefaciens FZB42 | NA | NA | NA | soil | 326423 | 13403 |
| Nitrobacter hamburgensis X14 | NA | NA | NA | soil | 323097 | 13473 |
| Nitrobacter winogradskyi Nb-255 | NA | NA | NA | soil | 323098 | 13474 |
| Bacillus pumilus F036B | NA | NA | NA | soil | 1408 | 13482 |
| Clostridium ljungdahlii PETC | NA | NA | NA | soil | 1538 | 13492 |
| Bacillus weihenstephanensis KBAB4 | NA | NA | NA | soil | 315730 | 13623 |
| Bacillus cereus NVH 391-98 | NA | NA | NA | soil | 315749 | 13624 |
| Streptomyces peucetius ATCC 27952 | NA | NA | NA | soil | 316280 | 13658 |
| Rhodococcus sp. RHA1 | NA | NA | NA | soil | 101510 | 13693 |
| Corynebacterium glutamicum ATCC 13032 | NA | NA | NA | soil | 196627 | 13760 |
| Shewanella sp. ANA-3 | NA | NA | NA | soil | 94122 | 13905 |
| Nitrosospira multiformis ATCC 25196 | NA | NA | NA | soil | 323848 | 13912 |
| Burkholderia cenocepacia HI2424, BCC1 | NA | NA | NA | soil | 331272 | 13918 |
| Burkholderia pseudomallei 1655 | NA | NA | NA | soil | 331109 | 13949 |
| Burkholderia pseudomallei 1710a | NA | NA | NA | soil | 320371 | 13950 |
| Burkholderia pseudomallei S13 | NA | NA | NA | soil | 320374 | 13951 |
| Burkholderia pseudomallei Pasteur | NA | NA | NA | soil | 331978 | 13952 |
| Burkholderia pseudomallei 668 | NA | NA | NA | soil | 320373 | 13953 |
| Burkholderia pseudomallei 1710b | NA | NA | NA | soil | 320372 | 13954 |
| Myxococcus xanthus DK 1622 | NA | NA | NA | soil | 246197 | 1421 |
| Ralstonia solanacearum UW551, R3B2 | NA | NA | NA | soil | 342110 | 15601 |
| Acidovorax sp. JS42 | NA | NA | NA | soil | 232721 | 15685 |
| Bacillus cereus F0837/76 | NA | NA | NA | soil | 347495 | 15716 |
| Rhodopseudomonas palustris HaA2 | NA | NA | NA | soil | 316058 | 15747 |
| Rhodopseudomonas palustris BisB5 | NA | NA | NA | soil | 316057 | 15749 |
| Rhodopseudomonas palustris BisB18 | NA | NA | NA | soil | 316056 | 15750 |
| Rhodopseudomonas palustris BisA53 | NA | NA | NA | soil | 316055 | 15751 |
| Xanthobacter autotrophicus Py2 | NA | NA | NA | soil | 78245 | 15756 |
| Psychrobacter sp. PRwf-1 | NA | NA | NA | soil | 349106 | 15759 |
| Mycobacterium sp. MCS | NA | NA | NA | soil | 164756 | 15762 |
| Ellin 345 | NA | NA | NA | soil | 204669 | 15771 |
| Azotobacter vinelandii AvOP | NA | NA | NA | soil | 322710 | 16 |
| Paenibacillus polymyxa E681 | NA | NA | NA | soil | 349520 | 16065 |
| Mycobacterium sp. JLS | NA | NA | NA | soil | 164757 | 16079 |
| Mycobacterium sp. KMS | NA | NA | NA | soil | 189918 | 16081 |
| Flavobacterium johnsoniae UW101 | NA | NA | NA | soil | 376686 | 16082 |
| Methylobacterium dichloromethanicum DM4 | NA | NA | NA | soil | 119024 | 16093 |
| Yersinia mollaretii ATCC 43969 | NA | NA | NA | soil | 349967 | 16105 |
| Burkholderia pseudomallei 1106b | NA | NA | NA | soil | 357347 | 16181 |
| Burkholderia pseudomallei 1106a | NA | NA | NA | soil | 357348 | 16182 |
| Clostridium phytofermentans ISDg | NA | NA | NA | soil | 357809 | 16184 |
| Bacillus cereus Q1 | NA | NA | NA | soil | 361100 | 16220 |
| Sinorhizobium medicae WSM419 | NA | NA | NA | soil | 366394 | 16304 |
| Desulfitobacterium hafniense Y51 | NA | NA | NA | soil | 138119 | 16639 |
| Yersinia pestis Antiqua | NA | NA | NA | soil | 360102 | 16645 |
| Yersinia pestis Nepal516 | NA | NA | NA | soil | 377628 | 16646 |
| Listeria monocytogenes FSL N3-165 | NA | NA | NA | soil | 393124 | 17313 |
| Delftia acidovorans SPH-1 | NA | NA | NA | soil | 398578 | 17413 |
| Pseudomonas mendocina ymp | NA | NA | NA | soil | 399739 | 17457 |
| Pseudomonas putida GB-1 | NA | NA | NA | soil | 76869 | 17629 |
| Bacillus cereus W | NA | NA | NA | soil | 405917 | 17717 |
| Anaeromyxobacter sp. Fw109-5 | NA | NA | NA | soil | 404589 | 17729 |
| Saccharopolyspora erythraea NRRL 23338 | NA | NA | NA | soil | 405948 | 17885 |
| Burkholderia cenocepacia MC0-3 | NA | NA | NA | soil | 406425 | 17929 |
| Streptomyces avermitilis MA-4680 | NA | NA | NA | soil | 227882 | 189 |
| Corynebacterium glutamicum R | NA | NA | NA | soil | 340322 | 19193 |
| Streptomyces clavuligerus ATCC 27064 | NA | NA | NA | soil | 443255 | 19249 |
| Burkholderia thailandensis E264, ATCC 700388 | NA | NA | NA | soil | 285005 | 19251 |
| Clostridium botulinum BoNT/A1 Hall | NA | NA | NA | soil | 441771 | 19521 |
| Methylobacterium chloromethanicum CM4 | NA | NA | NA | soil | 440085 | 19527 |
| Burkholderia thailandensis Bt4 | NA | NA | NA | soil | 441164 | 19533 |
| Burkholderia ubonensis Bu | NA | NA | NA | soil | 441166 | 19539 |
| Cellulomonas flavigena 134, DSM 20109 | NA | NA | NA | soil | 446466 | 19707 |
| Stackebrandtia nassauensis LLR-40K-21, DSM 44728 | NA | NA | NA | soil | 446470 | 19713 |
| Anaeromyxobacter sp. K | NA | NA | NA | soil | 447217 | 19743 |
| Bacillus cereus 03BB108 | NA | NA | NA | soil | 451709 | 19959 |
| Arthrobacter chlorophenolicus A6 | NA | NA | NA | soil | 452863 | 20011 |
| Streptomyces griseus IFO 13350, NBRC 13350 | NA | NA | NA | soil | 455632 | 20085 |
| Arthrobacter sp. Sphe3 | NA | NA | NA | soil | 361575 | 20087 |
| Pseudomonas pseudoalcaligenes MTCC 5210 | NA | NA | NA | soil | 468557 | 20259 |
| Methylocella silvestris BL2 | NA | NA | NA | soil | 395965 | 20635 |
| Micrococcus luteus Fleming 2665 | NA | NA | NA | soil | 465515 | 20655 |
| Conexibacter woesei ID131577, DSM 14684 | NA | NA | NA | soil | 469383 | 20745 |
| Beutenbergia cavernae HKI 0122, DSM 12333 | NA | NA | NA | soil | 471853 | 20827 |
| Saccharomonospora viridis P101, DSM 43017 | NA | NA | NA | soil | 471857 | 20835 |
| bacterium Ellin514 | NA | NA | NA | soil | 320771 | 20839 |
| Beijerinckia indica ATCC 9039 | NA | NA | NA | soil | 395963 | 20841 |
| Actinospica robiniae GE134769, DSM 44927 | NA | NA | NA | soil | 479430 | 21079 |
| Streptosporangium roseum NI 9100, DSM 43021 | NA | NA | NA | soil | 479432 | 21083 |
| Catenulispora acidiphila ID139908, DSM 44928 | NA | NA | NA | soil | 479433 | 21085 |
| Kribbella flavida DSM 17836 | NA | NA | NA | soil | 479435 | 21089 |
| Bacillus halodurans C-125 | NA | NA | NA | soil | 272558 | 235 |
| Ferroplasma acidarmanus Fer1 | NA | NA | NA | soil | 333146 | 239 |
| Salmonella typhimurium SGSC1412 / LT2 | NA | NA | NA | soil | 99287 | 241 |
| Nostoc sp. PCC 7120 | NA | NA | NA | soil | 103690 | 244 |
| Burkholderia xenovorans LB400 | NA | NA | NA | soil | 266265 | 254 |
| Pseudomonas putida KT2440 | NA | NA | NA | soil | 160488 | 267 |
| Pseudomonas putida PRS1 | NA | NA | NA | soil | 160489 | 268 |
| Ktedonobacter racemifer SOSP1-21, DSM 44963 | NA | NA | NA | soil | 485913 | 27943 |
| Pedobacter heparinus HIM 762-3, DSM 2366 | NA | NA | NA | soil | 485917 | 27949 |
| Cellvibrio japonicus Ueda107 | NA | NA | NA | soil | 498211 | 28329 |
| Mycobacterium sp. Spyr1 | NA | NA | NA | soil | 278137 | 28521 |
| Streptomyces pristinaespiralis ATCC 25486 | NA | NA | NA | soil | 457429 | 28553 |
| Streptomyces sviceus ATCC 29083 | NA | NA | NA | soil | 463191 | 28555 |
| Bacillus pseudofirmus OF4 | NA | NA | NA | soil | 398511 | 28811 |
| Thermobaculum terrenum YNP1, ATCC BAA-798 | NA | NA | NA | soil | 525904 | 29523 |
| Geodermatophilus obscurus G-20, DSM 43160 | NA | NA | NA | soil | 526225 | 29547 |
| Bacillus anthracis A0039 | NA | NA | NA | soil | 261592 | 29603 |
| Bacillus cereus AH621 | NA | NA | NA | soil | 526972 | 29655 |
| Bacillus cereus Rock 1-3 | NA | NA | NA | soil | 526981 | 29673 |
| Bacillus cereus Rock 1-15 | NA | NA | NA | soil | 526982 | 29675 |
| Bacillus cereus Rock3-28 | NA | NA | NA | soil | 526983 | 29677 |
| Bacillus cereus Rock3-29 | NA | NA | NA | soil | 526984 | 29679 |
| Bacillus cereus Rock3-42 | NA | NA | NA | soil | 526985 | 29681 |
| Bacillus cereus Rock3-44 | NA | NA | NA | soil | 526986 | 29683 |
| Bacillus cereus Rock4-2 | NA | NA | NA | soil | 526987 | 29685 |
| Bacillus cereus Rock4-18 | NA | NA | NA | soil | 526988 | 29687 |
| Bacillus cereus AH676 | NA | NA | NA | soil | 526991 | 29693 |
| Bacillus mycoides DSM 2048 | NA | NA | NA | soil | 526997 | 29701 |
| Bacillus mycoides Rock1-4 | NA | NA | NA | soil | 526998 | 29703 |
| Bacillus mycoides Rock3-17 | NA | NA | NA | soil | 526999 | 29705 |
| Bacillus pseudomycoides DSM 12442 | NA | NA | NA | soil | 527000 | 29707 |
| Bacillus thuringiensis sv tochigiensis BGSC 4Y1 | NA | NA | NA | soil | 527024 | 29713 |
| Bacillus thuringiensis sv pondicheriensis BGSC 4BA1 | NA | NA | NA | soil | 527029 | 29727 |
| Bacillus pumilus ATCC 7061 | NA | NA | NA | soil | 536229 | 29785 |
| Bacillus subtilis JH642 | NA | NA | NA | soil | 535025 | 29817 |
| Bacillus subtilis SMY | NA | NA | NA | soil | 535024 | 29851 |
| Bacillus subtilis NCIB3 610 | NA | NA | NA | soil | 535026 | 29891 |
| Bacillus subtilis N170 | NA | NA | NA | soil | 536089 | 30013 |
| Bacillus subtilis L170 | NA | NA | NA | soil | 536088 | 30019 |
| Bacillus megaterium QM B1551 | NA | NA | NA | soil | 545693 | 30165 |
| Rhodococcus opacus PD630 | NA | NA | NA | soil | 543736 | 30413 |
| Corynebacterium efficiens YS-314T | NA | NA | NA | soil | 196164 | 305 |
| Bacillus anthracis Ames | NA | NA | NA | soil | 198094 | 309 |
| Bacillus anthracis Kruger B (GT87) | NA | NA | NA | soil | 205919 | 324 |
| Bacillus anthracis WesternNA USA6153 (A0071, GT3 Group A1a) | NA | NA | NA | soil | 212045 | 337 |
| Bacillus cereus ATCC14579 DSM 31 | NA | NA | NA | soil | 226900 | 384 |
| Desulfovibrio vulgaris Hildenborough | NA | NA | NA | soil | 882 | 51 |
| Nitrosomonas europaea IFO | NA | NA | NA | soil | 228410 | 52 |
| Cytophaga hutchinsonii ATCC 33406 | NA | NA | NA | soil | 269798 | 54 |
| Deinococcus radiodurans USUHS (R1) | NA | NA | NA | soil | 243230 | 65 |
| Clostridium acetobutylicum ATCC 824D | NA | NA | NA | soil | 272562 | 77 |
| Clostridium perfringens 13 | NA | NA | NA | soil | 195102 | 79 |
| Listeria innocua Clip11262, rhamnose-negative | NA | NA | NA | soil | 272626 | 86 |
| Streptomyces ambofaciens ATCC 23877 | NA | NA | NA | soil | 278992 | 93 |
| Thermobifida fusca YX | NA | NA | NA | soil | 269800 | 94 |
| Gloeobacter violaceus PCC 7421 | NA | NA | NA | soil | 251221 | 9606 |
| Psychrobacter arcticus 273-4 | NA | NA | NA | soil | 259536 | 9633 |
| RC-I | NA | NA | NA | soil | 351160 | 19641 |
