genomes
overview
Browse genomes by isolation enviroment
Click a Location to retrieve environmental data
We manually annotate the genome collection with EnvO-Lite terms to offer users further comparative perspectives. The tag-cloud below can be used to sort genomes by EnvO-Lite annotations. Clicking on coordinates in the "Location" column will access environmental data via our mapserver. See our Annotation Overview for more details.
Please note that "marine habitat" refers to marine water!
unclassified (11) air (1) animal-associated habitat (876) aquatic habitat (43) cultured habitat (38) extreme habitat (21) food (62) freshwater habitat (28) hot spring (61) hydrothermal vent (27) marine habitat (227) organism-associated habitat (21) plant-associated habitat (90) sediment (85) sludge (17) soil (171) terrestrial habitat (42) waste water (12)
| Organism Name | Location | Depth | Date Sampled | EnvO-Lite | TaxID | Genome PID |
|---|---|---|---|---|---|---|
| Desulfotalea psychrophila LSv54 | 79 N 11 E | NA | NA | sediment | 177439 | 12751 |
| Hahella chejuensis KCTC 2396 | 33 N 127 E | NA | NA | sediment | 349521 | 16064 |
| Methanosarcina acetivorans C2A | 32.87 N 117.27 W | 19.8 m | NA | sediment | 188937 | 290 |
| Methanococcus maripaludis S2 | 33.3 N 79.15 W | NA | NA | sediment | 267377 | 10632 |
| Geobacter metallireducens GS-15 | NA | NA | NA | sediment | 269799 | 177 |
| Desulfotomaculum reducens MI-1 | NA | NA | NA | sediment | 349161 | 13424 |
| Anaeromyxobacter dehalogenans 2CP-1 | NA | NA | NA | sediment | 455488 | 20095 |
| Clostridium carboxidivorans P7 | NA | NA | NA | sediment | 536227 | 29495 |
| Shewanella halifaxensis HAW-EB4 | NA | NA | NA | sediment | 458817 | 20241 |
| Polaromonas sp. JS666 | NA | NA | NA | sediment | 296591 | 13121 |
| Methanococcus maripaludis C6 | NA | NA | NA | sediment | 444158 | 19639 |
| Pelobacter propionicus DSM 2379 | NA | NA | NA | sediment | 338966 | 13384 |
| Desulfuromonas acetoxidans DSM 684 | NA | NA | NA | sediment | 281689 | 12551 |
| Caulobacter vibrioides CB15 | NA | NA | NA | sediment | 190650 | 298 |
| Bacillus selenitireducens MLS-10 | NA | NA | NA | sediment | 439292 | 13376 |
| Sulfurospirillum deleyianum 5175, DSM 6946 | NA | NA | NA | sediment | 525898 | 29529 |
| Sulfurimonas denitrificans ATCC 33889 | NA | NA | NA | sediment | 326298 | 13019 |
| Methanosarcina barkeri Fusaro | NA | NA | NA | sediment | 269797 | 103 |
| Methanococcus voltae | NA | NA | NA | sediment | 2188 | 13632 |
| Bacillus sp. SG-1 | NA | NA | NA | sediment | 161544 | 19283 |
| Geobacter sulfurreducens PCA | NA | NA | NA | sediment | 243231 | 192 |
| Clostridium kluyveri DSM 555 | NA | NA | NA | sediment | 431943 | 19065 |
| Magnetospirillum gryphiswaldense MSR-1 | NA | NA | NA | sediment | 431944 | 19063 |
| Arcobacter | NA | NA | NA | sediment | 162154 | 19297 |
| Methanothermococcus thermolithotrophicus | NA | NA | NA | sediment | 2186 | 13627 |
| Ralstonia pickettii 12D | NA | NA | NA | sediment | 428406 | 18937 |
| Methanococcus maripaludis C7 | NA | NA | NA | sediment | 426368 | 18819 |
| Shewanella sediminis HAW-EB3T | NA | NA | NA | sediment | 425104 | 18789 |
| Colwellia psychrerythraea 34H | NA | NA | NA | sediment | 167879 | 275 |
| Beggiatoa sp. SS | NA | NA | NA | sediment | 422288 | 18685 |
| Beggiatoa sp. PS | NA | NA | NA | sediment | 422289 | 18683 |
| Methanococcus aeolicus Nankai-3 | NA | NA | NA | sediment | 419665 | 18641 |
| Labrenzia aggregata IAM12614 | NA | NA | NA | sediment | 384765 | 18315 |
| Methanocorpusculum labreanum Z | NA | NA | NA | sediment | 410358 | 18109 |
| Methanococcus vannielii SB | NA | NA | NA | sediment | 406327 | 17889 |
| Geobacter bemidjiensis Bem | NA | NA | NA | sediment | 404380 | 17707 |
| Shewanella piezotolerans WP3 | NA | NA | NA | sediment | 225849 | 17675 |
| Methanococcus maripaludis C5 | NA | NA | NA | sediment | 402880 | 17641 |
| Ralstonia pickettii 12J | NA | NA | NA | sediment | 402626 | 17631 |
| Candidatus Ovobacter candidatus ovobacter propellens Op_Nibab3 | NA | NA | NA | sediment | 439487 | 19335 |
| Bordetella petrii Se-1111R, DSM 12804 | NA | NA | NA | sediment | 340100 | 28135 |
| Geobacter lovleyi SZ | NA | NA | NA | sediment | 398767 | 17423 |
| Salinispora arenicola CNS205 | NA | NA | NA | sediment | 391037 | 17109 |
| Chlorobium ferrooxidans DSM 13031 | NA | NA | NA | sediment | 377431 | 16644 |
| Clostridium DSM 519 | NA | NA | NA | sediment | 499177 | 28575 |
| Thermoanaerobacter X514 | NA | NA | NA | sediment | 399726 | 16394 |
| Halothermothrix orenii H 168 | NA | NA | NA | sediment | 373903 | 16377 |
| Salinispora tropica CNB-440 | NA | NA | NA | sediment | 369723 | 16342 |
| Methanoculleus marisnigri JR1 | NA | NA | NA | sediment | 368407 | 16330 |
| Sulfolobus solfataricus P2 | NA | NA | NA | sediment | 273057 | 108 |
| Alkaliphilus oremlandii OhILAs | NA | NA | NA | sediment | 350688 | 16083 |
| Shewanella violacea DSS12 | NA | NA | NA | sediment | 60217 | 15729 |
| Rhodobacter sphaeroides 2.4.1 | NA | NA | NA | sediment | 272943 | 56 |
| Rhodobacter sphaeroides ATCC 17029 | NA | NA | NA | sediment | 349101 | 15754 |
| Rhodopseudomonas palustris CGA009 | NA | NA | NA | sediment | 258594 | 57 |
| Synechococcus PCC 7002 | NA | NA | NA | sediment | 32049 | 28247 |
| Desulfovibrio vulgaris DP4 | NA | NA | NA | sediment | 391774 | 17227 |
| Geobacter uraniumreducens RF4 | NA | NA | NA | sediment | 351605 | 15768 |
| Halorhodospira halophila SL1 | NA | NA | NA | sediment | 349124 | 15767 |
| Methanosaeta methanothrix thermophila PT | NA | NA | NA | sediment | 349307 | 15765 |
| Mycobacterium vanbaalenii PYR-1 | NA | NA | NA | sediment | 350058 | 15761 |
| Mycobacterium gilvum PYR-GCK | NA | NA | NA | sediment | 350054 | 15760 |
| Rhodobacter sphaeroides ATCC 17025 | NA | NA | NA | sediment | 349102 | 15755 |
| Acidiphilium cryptum JF-5 | NA | NA | NA | sediment | 349163 | 15753 |
| Desulfovibrio magneticus RS-1 | NA | NA | NA | sediment | 184917 | 15681 |
| Clostridium botulinum Eklund 17B | NA | NA | NA | sediment | 508765 | 28857 |
| Hyperthermus butylicus DSM 5456 | NA | NA | NA | sediment | 415426 | 208 |
| Dehalococcoides sp. CBDB1 | NA | NA | NA | sediment | 255470 | 15604 |
| Desulfohalobium retbaense DSM 5692 | NA | NA | NA | sediment | 485915 | 29199 |
| Polaromonas naphthalenivorans CJ2 | NA | NA | NA | sediment | 365044 | 13418 |
| Nostoc punctiforme ATCC 29133 | NA | NA | NA | sediment | 63737 | 216 |
| Pelobacter carbinolicus DSM 2380 | NA | NA | NA | sediment | 338963 | 13337 |
| Shewanella putrefaciens CN-32 | NA | NA | NA | sediment | 319224 | 13393 |
| Novosphingobium aromaticivorans DSM 12444 (F199) | NA | NA | NA | sediment | 279238 | 204 |
| Shewanella amazonensis SB2B | NA | NA | NA | sediment | 326297 | 13385 |
| Azoarcus sp. EbN1 | NA | NA | NA | sediment | 76114 | 13242 |
| Exiguobacterium sibiricum 255-15 | NA | NA | NA | sediment | 262543 | 10649 |
| Desulfatibacillum alkenivorans AK-01 | NA | NA | NA | sediment | 439235 | 19449 |
| Rhodoferax ferrireducens T118 | NA | NA | NA | sediment | 338969 | 13908 |
| Shewanella sp. W3-18-1 | NA | NA | NA | sediment | 351745 | 13902 |
| Halorhabdus utahensis AX-2, DSM 12940 | NA | NA | NA | sediment | 519442 | 29305 |
| Archaeoglobus fulgidus VC-16 | NA | NA | NA | sediment | 224325 | 104 |
| Candidatus Methanosphaerula candidatus methanosphaerula palustris E1-9c | NA | NA | NA | sediment | 521011 | 29381 |
| Oceanobacillus iheyensis HTE831 | 27.7 N 126.95 E | 1050.0 m | NA | sediment | 221109 | 284 |
| Erythrobacter sp. SD-21 | 32.7 N 117.17 W | 10.0 m | NA | sediment | 161528 | 19305 |
