genomes
overview

Browse genomes by isolation enviroment

Click a Location to retrieve environmental data

We manually annotate the genome collection with EnvO-Lite terms to offer users further comparative perspectives. The tag-cloud below can be used to sort genomes by EnvO-Lite annotations. Clicking on coordinates in the "Location" column will access environmental data via our mapserver. See our Annotation Overview for more details.

Please note that "marine habitat" refers to marine water!

unclassified (11) air (1) animal-associated habitat (876) aquatic habitat (43) cultured habitat (38) extreme habitat (21) food (62) freshwater habitat (28) hot spring (61) hydrothermal vent (27) marine habitat (227) organism-associated habitat (21) plant-associated habitat (90) sediment (85) sludge (17) soil (171) terrestrial habitat (42) waste water (12)


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Organism Name Location Depth Date Sampled EnvO-Lite TaxID Genome PID
Calothrix sp. SC01 22.75 N 158 W 27.5 mNAmarine habitat 439482 19291
Crocosphaera watsonii WH0002 22.75 N 158 W 27.5 mNAmarine habitat 344748 15661
Hoeflea phototrophica DFL-43 54.13 N 7.87 E 10.0 mNAmarine habitat 411684 19311
Oceanibulbus indolifex HEL-45 54.13 N 7.87 E 10.0 mNAmarine habitat 391624 19327
Synechococcus sp. WH7805 33.75 N 67.5 W NANAmarine habitat 59931 13553
Octadecabacter arcticus 238 73.02 N 148.52 W NANAmarine habitat 391616 19331
Methanogenium frigidum Ace-2 (=SMCC459W) 68.4 S 78.18 E 24.0 mNAmarine habitat 313587 13497
Carnobacterium sp. AT7 52.89 N 163 W 2500.0 mNAmarine habitat 333990 19299
Vibrio campbellii AND4 7.8 N 98.21 E NANAmarine habitat 314289 13564
Prochlorococcus marinus AS9601 19 S 67 E 50.0 mNAmarine habitat 146891 13548
Idiomarina baltica OS145 59.32 N 20.05 W 30.0 mNAmarine habitat 314276 13408
Pedobacter sp. BAL39 63.52 N 19.82 E 4.0 mNAmarine habitat 391596 19337
Brevundimonas sp. BAL3 63.52 N 19.82 E 4.0 mNAmarine habitat 391600 19287
Vibrio shilonii AK1 32.49 N 34.89 E 3.0 mNAmarine habitat 391591 19397
Nodularia spumigena CCY9414 55.53 N 16.62 E NANAmarine habitat 313624 13447
Vibrio angustum S14 34.02 S 151.32 E NANAmarine habitat 314292 13567
Roseovarius nubinhibens ISM 22.06 N 74.06 W NANAmarine habitat 89187 13464
Psychromonas sp. CNPT3 30 N 165 W NANAmarine habitat 314282 13583
Plesiocystis pacifica SIR-1 20 N 116 E NANAmarine habitat 391625 19341
Dehalobium chlorocoercia DF-1 32.79 N 79.97 W 3.0 mNAmarine habitat 391609 19303
Planctomyces maris DSM 8797 48.4 N 122.6 W NANAmarine habitat 344747 15662
Roseovarius sp. 217 50.25 N 4.22 W NANAmarine habitat 314264 13576
Limnobacter sp. MED105 32.81 N 34.69 E NANAmarine habitat 391597 19317
Marinobacter sp. ELB17 77 S 168 W 17.0 mNAmarine habitat 270374 18955
Thermococcus sp. AM4 12.13 N 103.93 W 2615.0 mNAmarine habitat 246969 19381
Roseobacter sp. AzwK-3b 36.84 N 121.75 W NANAmarine habitat 351016 19361
Prochlorococcus marinus MIT9515 5.12 S 107.02 W NANAmarine habitat 167542 13617
Nitrococcus mobilis Nb-231 0.3 S 91.65 W NANAmarine habitat 314278 13475
Synechococcus sp. MITS9220 0 S 140 W 83.0 mNAmarine habitat 166309 19375
Prochlorococcus marinus MIT9211 0 S 140 W 83.0 mNAmarine habitat 93059 13551
Geobacillus kaustophilus HTA426 11.352 N 142.432 E 10897.0 mNAmarine habitat 235909 13233
Synechococcus sp. M11.1 27.72 N 91.25 W 275.0 mNAmarine habitat 351026 19371
Synechococcus sp. M16.17 27.72 N 91.25 W 275.0 mNAmarine habitat 351025 19373
Alteromonas macleodii Deep ecotype, DSM 17117 41.6 N 17.37 E 3500.0 mNAmarine habitat 314275 13374
Marinobacter algicola DG893 36 N 123 E NANAmarine habitat 443152 19321
Blastopirellula marina SH 106T, DSM 3645 54.4 N 10.2 E NANAmarine habitat 314230 13488
Mariprofundus ferrooxydans PV-1 18.95 N 155.25 W 1100.0 mNAmarine habitat 314345 13615
Kordia algicida OT-1 35.17 N 128.58 E 1.0 mNAmarine habitat 391587 19315
Octadecabacter antarcticus 307 77.88 S 166.58 E NANAmarine habitat 391626 19333
Lyngbya sp. CCY9616 53.71 N 8.14 E NANAmarine habitat 313612 13409
Reinekea sp. MED297NANANAmarine habitat 314283 13534
Moritella sp. PE36NANANAmarine habitat 58051 13535
methylophilales bacterium htcc2181 HTCC2181 (OM43 clade)NANANAmarine habitat 383631 18317
Thermosipho africanus TCF52BNANANAmarine habitat 484019 27767
Thermotoga sp. RQ2NANANAmarine habitat 126740 19543
Psychroflexus torquis ATCC 700755NANANAmarine habitat 313595 13542
TW-7NANANAmarine habitat 156578 18465
Unclassified marine gamma proteobacterium htcc2080 HTCC2080NANANAmarine habitat 247639 18487
Haliangium SMP-2, DSM 14365NANANAmarine habitat 502025 28711
Polaribacter dokdonensis MED152NANANAmarine habitat 313598 13543
Dokdonia donghaensis MED134NANANAmarine habitat 313590 13544
Halobaculum gomorrenseNANANAmarine habitat 43928 13229
Labrenzia alexandrii DFL-11NANANAmarine habitat 244592 19367
Bacillus sp. NRRL B-14911NANANAmarine habitat 313627 13545
Janibacter sp. HTCC2649NANANAmarine habitat 313589 13546
Dethiosulfovibrio peptidovorans SEBR 4207, DSM 11002NANANAmarine habitat 469381 20741
Dermocarpa sp. 0006NANANAmarine habitat 344743 13550
Prochlorococcus marinus MIT9215NANANAmarine habitat 93060 18633
Trichodesmium erythraeum IMS101NANANAmarine habitat 203124 318
Trichodesmium thiebautii II-3NANANAmarine habitat 306282 13552
Jannaschia sp. CCS1NANANAmarine habitat 290400 12733
Synechococcus sp. WH5701NANANAmarine habitat 69042 13554
Desulfovibrio vulgaris Miyazaki FNANANAmarine habitat 883 27731
Thermithiobacillus tepidarius HTCC5015NANANAmarine habitat 391615 19309
Synechococcus sp. BL107NANANAmarine habitat 313625 13559
Sulfitobacter sp. GAI-109NANANAmarine habitat 314268 13560
Unclassified oligobacter sp. ska48 SKA48NANANAmarine habitat 314257 13565
Gramella forsetii KT0803NANANAmarine habitat 411154 19061
Shewanella baltica OS223NANANAmarine habitat 407976 17985
Myxococcus fulvus HW-1NANANAmarine habitat 483219 27837
Haloferax volcanii DS2NANANAmarine habitat 309800 12524
Microcystis aeruginosa NIES-843NANANAmarine habitat 449447 27835
PHSC20C1NANANAmarine habitat 312284 13373
Robiginitalea biformata HTCC2501NANANAmarine habitat 313596 13461
Glaciecola sp. HTCC 2999NANANAmarine habitat 455436 20121
Maricaulis maris MCS10NANANAmarine habitat 394221 17333
Prochlorococcus marinus NATL1ANANANAmarine habitat 167555 15660
Kangiella koreensis SW-125, DSM 16069NANANAmarine habitat 523791 29443
Bacteriovorax marinus SJNANANAmarine habitat 97084 12622
Polaribacter filamentusNANANAmarine habitat 53483 13335
Chlorobium phaeobacteroides BS1NANANAmarine habitat 331678 12608
Vibrio cholerae RC385NANANAmarine habitat 345074 15668
Alteromonas macleodii ATCC 27126NANANAmarine habitat 529120 29793
Unclassified candidatus thioturbo danicus Td_Nivab1NANANAmarine habitat 439501 19385
Chlorobium phaeovibrioides DSM 265NANANAmarine habitat 290318 12607
Cyanothece BH68, ATCC 51142NANANAmarine habitat 43989 20319
Synechococcus sp. CC9902 (coastal)NANANAmarine habitat 316279 13655
Silicibacter sp. TM1040NANANAmarine habitat 292414 13040
Thioploca araucae Tha-CCLNANANAmarine habitat 439499 19383
Prochlorococcus marinus NATL2ANANANAmarine habitat 59920 13911
Prochlorococcus marinus MIT9312NANANAmarine habitat 74546 13910
Pseudoalteromonas haloplanktis TAC125NANANAmarine habitat 326442 15713
Sphingopyxis alaskensis RB2256NANANAmarine habitat 317655 13907
Shewanella loihica PV-4NANANAmarine habitat 323850 13906
Hyphomonas neptunium ATCC 15444NANANAmarine habitat 228405 15721
Kytococcus sedentarius DSM 20547NANANAmarine habitat 478801 21067
Shewanella sp. MR-4NANANAmarine habitat 60480 13904
Shewanella sp. MR-7NANANAmarine habitat 60481 13903
Sulfitobacter sp. EE-36NANANAmarine habitat 52598 13501
Fulvimarina pelagi HTCC2506NANANAmarine habitat 314231 13506
Unclassified rhodobacterales bacterium htcc2083 HTCC2083NANANAmarine habitat 314270 13508
Haloarcula marismortui ATCC43049NANANAmarine habitat 272569 105
Prosthecochloris aestuarii SK413NANANAmarine habitat 290512 12749
Marinobacter hydrocarbonoclasticus VT8NANANAmarine habitat 351348 13239
Parvularcula bermudensis HTCC2503NANANAmarine habitat 314260 13509
Nitrosomonas sp. 17NANANAmarine habitat 314272 13517
Synechococcus sp. RCC307NANANAmarine habitat 316278 13654
Synechococcus WH 7803NANANAmarine habitat 32051 13642
Vibrio harveyi HY01NANANAmarine habitat 410291 17467
Unclassified campylobacterales bacterium gd 1 GD 1NANANAmarine habitat 439483 19295
Candidatus Pelagibacter HTCC7211NANANAmarine habitat 439493 19339
Shewanella frigidimarina NCIMB 400NANANAmarine habitat 318167 13391
Alcanivorax borkumensis SK2NANANAmarine habitat 393595 13005
Shewanella baltica OS195NANANAmarine habitat 399599 13389
Shewanella denitrificans OS217NANANAmarine habitat 318161 13390
Nitrosococcus oceani C-107NANANAmarine habitat 323261 13993
Shewanella woodyi MS32NANANAmarine habitat 392500 17455
Synechococcus elongatus PCC7942NANANAmarine habitat 1140 10645
Phaeobacter gallaeciensis BS107NANANAmarine habitat 391619 19355
Lentisphaera araneosa HTCC2155NANANAmarine habitat 313628 13437
Marinomonas sp. MWYL1NANANAmarine habitat 400668 17445
alpha proteobacterium bal199 BAL199NANANAmarine habitat 331869 19281
Nitrospina gracilis Nb-211NANANAmarine habitat 314274 13445
Shewanella baltica OS155NANANAmarine habitat 325240 13386
Nitrospira marina Nb-295NANANAmarine habitat 35815 13446
Vibrio parahaemolyticus 16NANANAmarine habitat 391586 19395
Oceanicaulis alexandrii HTCC2633NANANAmarine habitat 314254 13448
Oceanicola batsensis HTCC2597NANANAmarine habitat 252305 13449
Oceanicola granulosus HTCC2516NANANAmarine habitat 314256 13450
Chlorobaculum parvum NCIB 8327NANANAmarine habitat 517417 29213
Unclassified unidentified eubacterium scb49 SCB49NANANAmarine habitat 50743 19389
Thiovulum majus Tm_Nivab2NANANAmarine habitat 439522 19387
Dinoroseobacter shibae DFL-12NANANAmarine habitat 398580 17417
Zobellia galactanivorans DsijTNANANAmarine habitat 63186 16099
Methylophaga thalassica S1NANANAmarine habitat 40223 13471
Shewanella putrefaciens 200NANANAmarine habitat 399804 13392
Erythrobacter litoralis HTCC2594NA10.0 mNAmarine habitat 314225 13480
Neptuniibacter caesariensis MED92NANANAmarine habitat 207954 13561
Roseobacter sp. SIO67NANANAmarine habitat 391588 19359
Sagittula stellata E-37NANANAmarine habitat 388399 18971
Roseobacter sp. CCS2NANANAmarine habitat 391593 18995
Vibrio splendidus 12B01NANANAmarine habitat 314291 13568
Croceibacter atlanticus HTCC2559NANANAmarine habitat 216432 13570
Vibrio alginolyticus 12G01NANANAmarine habitat 314288 13571
Roseovarius sp. HTCC2601NANANAmarine habitat 314265 13574
flavobacteriales bacterium alc-1 ALC-1NANANAmarine habitat 391603 19307
Unclassified gamma proteobacterium htcc2207 HTCC2207NANANAmarine habitat 314287 16658
Unclassified marine alpha proteobacterium y4i Y4INANANAmarine habitat 439496 19349
Vibrio harveyi ATCC BAA-1116NANANAmarine habitat 338187 16347
Carboxydibrachium pacificum JM, DSM 12653NANANAmarine habitat 391606 19289
Rhodoferax sp. BAL47NANANAmarine habitat 443151 19351
Roseobacter denitrificans OCh 114NANANAmarine habitat 375451 16426
Magnetococcus sp. MC-1NANANAmarine habitat 156889 262
Candidatus Pelagibacter candidatus pelagibacter ubique HTCC1002NANANAmarine habitat 314261 13577
Saccharophagus degradans 2-40NANANAmarine habitat 203122 316
Roseobacter litoralis Och 149NANANAmarine habitat 391595 19357
Leptolyngbya valderiana BDU 20041NANANAmarine habitat 322866 19525
Congregibacter litoralis KT71NANANAmarine habitat 314285 13585
Roseovarius sp. TM1035NANANAmarine habitat 391613 19363
Photobacterium profundum SS9NANANAmarine habitat 298386 13128
Marinobacter sp. FO2NANANAmarine habitat 314342 13586
Psychromonas ingrahamii 37NANANAmarine habitat 357804 16187
Synechococcus sp. CC9605 (oligotrophic)NANANAmarine habitat 110662 13643
Cyanobium sp. PCC 7001NANANAmarine habitat 180281 19301
Algoriphagus sp. PR1NANANAmarine habitat 388413 18947
Bacillus sp. B14905NANANAmarine habitat 388400 18949
Unclassified flavobacteria bacterium bal38 BAL38NANANAmarine habitat 391598 18953
Unclassified rhodobacterales bacterium htcc2150 HTCC2150 (RCA clade)NANANAmarine habitat 388401 18973
Methanococcus voltae A3NANANAmarine habitat 456320 20131
Unclassified flavobacteriales bacterium htcc2170 HTCC2170NANANAmarine habitat 313603 13595
Rhodopseudomonas palustris TIE-1NANANAmarine habitat 395960 20167
beta proteobacterium kb13 KB13NANANAmarine habitat 314607 13602
Roseobacter sp. SK209-2-6NANANAmarine habitat 388739 18997
Phaeobacter gallaeciensis 2.10NANANAmarine habitat 383629 19353
Planctomyces limnophilus DSM 3776NANANAmarine habitat 521674 29411
Unclassified flavobacteria bacterium bbfl7 BBFL7NANANAmarine habitat 156586 13604
Denitrovibrio acetiphilus N2460, DSM 12809NANANAmarine habitat 522772 29431
Unclassified marine gamma proteobacterium htcc2143 HTCC2143NANANAmarine habitat 247633 13605
Aurantimonas SI85-9A1NANANAmarine habitat 314269 13607
Unclassified rhodobacterales bacterium htcc2177 HTCC2177NANANAmarine habitat 314258 13613
Unclassified rhodobacterales bacterium htcc2654 HTCC2654NANANAmarine habitat 314271 13614
Unclassified vibrionales bacterium swat-3 SWAT-3NANANAmarine habitat 391574 19399
Shewanella baltica OS185NANANAmarine habitat 402882 17643
flavobacteria bacterium MS024-3CNANANAmarine habitat 487797 28051
flavobacteria bacterium ms024-2a MS024-2ANANANAmarine habitat 487796 28049
HTCC2255NANANAmarine habitat 373154 17677
Petrotoga mobilis SJ95tNANANAmarine habitat 403833 17679
Vibrio harveyi BB120, ATCC BAA-1116NANANAmarine habitat 338187 19857
Microscilla marina ATCC 23134NANANAmarine habitat 313606 13411
Crocosphaera watsonii WH 8501NANANAmarine habitat 165597 10651
Synechococcus sp. CC9311NANANAmarine habitat 64471 12530
Methylophaga sp. DMS010NANANAmarine habitat 392484 19323
Acaryochloris marina MBIC11017NANANAmarine habitat 329726 12997
Erythrobacter sp. NAP1 39.6 N 72.45 W NANAmarine habitat 237727 13512
Vibrio sp. MED222 41.67 N 2.8 E 1.0 mNAmarine habitat 314290 13616
Marinomonas sp. MED121 41.67 N 2.8 E 1.0 mNAmarine habitat 314277 13587
Roseobacter sp. MED193 41.67 N 2.8 E 1.0 mNAmarine habitat 314262 13590
Leeuwenhoekiella blandensis MED217 41.67 N 2.8 E 1.0 mNAmarine habitat 398720 13573
Photobacterium sp. SKA34 58.94 N 11.08 E 4.0 mNAmarine habitat 121723 13566
Loktanella vestfoldensis SKA53 58.94 N 11.08 E 4.0 mNAmarine habitat 314232 13444
Sphingomonas sp. SKA58 58.94 N 11.08 E 4.0 mNAmarine habitat 314266 13584
Stenotrophomonas sp. SKA14 58.94 N 11.08 E 4.0 mNAmarine habitat 391601 19369
Sulfitobacter sp. NAS-14.1 33.05 N 74.05 W NANAmarine habitat 314267 13591
Nitrosococcus oceani AFC-27 (= Nc9) 43 N 155 W NANAmarine habitat 314279 13547
Prochlorococcus marinus CCMP1986 (MED4) 43.2 N 6.9 E NANAmarine habitat 59919 213
Prochlorococcus marinus MIT9313 37.5 N 68.2 W 135.0 mNAmarine habitat 74547 220
Prochlorococcus marinus CCMP1375 (SS120) 29 N 64.4 W NANAmarine habitat 167539 419
Candidatus Pelagibacter candidatus pelagibacter ubique HTCC1062 44.652 N 124.412 W NANAmarine habitat 335992 13989
Alcanivorax sp. DG881 42.89 S 147.78 E NANAmarine habitat 236097 19279
Polaribacter irgensii 23-P 65.25 S 64.27 W NANAmarine habitat 313594 13451
Rhodopirellula baltica SH 1 54.5 N 10.3 E NANAmarine habitat 243090 413
Oceanobacter sp. RED65 29.85 N 35.57 W 1.0 mNAmarine habitat 207949 13562
Silicibacter pomeroyi DSS-3 30.8 N 81 W NANAmarine habitat 246200 281
Synechococcus WH8102 22.495 N 65.6 W NANAmarine habitat 84588 230
Microcoleus chthonoplastes PCC 7420 41.52 N 70.68 W NANAmarine habitat 118168 19325
Acaryochloris sp. CCMEE 5410 33 N 116 W NANAmarine habitat 310037 16707
Photobacterium profundum 3TCK 32 N 117 W NANAmarine habitat 314280 13563
Prochlorococcus marinus MIT9303 34.75 N 66.18 W 100.0 mNAmarine habitat 59922 13496
Prochlorococcus marinus MIT9301 34.17 N 66.3 W 90.0 mNAmarine habitat 167546 15746
Synechococcus sp. PCC 7335 31.32 N 113.53 W NANAmarine habitat 91464 19377
Prochlorococcus marinus MIT9202 12 S 145.42 W 79.0 mNAmarine habitat 93058 19343
Shewanella benthica KT99, PT99 20 S 173 W NANAmarine habitat 314608 13387
Nitrobacter Nb-311A 8.8 S 13.23 E NANAmarine habitat 314253 13538
Cyanothece sp. CCY 0110 6.14 S 39.46 E 10.0 mNAmarine habitat 391612 18951
Ruegeria sp. R11 33.99 S 151.27 E NANAmarine habitat 439497 19365
Synechococcus sp. RS9917 (= RCC556) 29.47 N 34.92 E 10.0 mNAmarine habitat 221360 13555
Synechococcus sp. RS9916 (= RCC555) 29.47 N 34.92 E 10.0 mNAmarine habitat 221359 13557