genomes
overview
Browse genomes by isolation enviroment
Click a Location to retrieve environmental data
We manually annotate the genome collection with EnvO-Lite terms to offer users further comparative perspectives. The tag-cloud below can be used to sort genomes by EnvO-Lite annotations. Clicking on coordinates in the "Location" column will access environmental data via our mapserver. See our Annotation Overview for more details.
Please note that "marine habitat" refers to marine water!
unclassified (11) air (1) animal-associated habitat (876) aquatic habitat (43) cultured habitat (38) extreme habitat (21) food (62) freshwater habitat (28) hot spring (61) hydrothermal vent (27) marine habitat (227) organism-associated habitat (21) plant-associated habitat (90) sediment (85) sludge (17) soil (171) terrestrial habitat (42) waste water (12)
| Organism Name | Location | Depth | Date Sampled | EnvO-Lite | TaxID | Genome PID |
|---|---|---|---|---|---|---|
| Oenococcus oeni PSU-1 | NA | NA | NA | food | 203123 | 317 |
| Listeria monocytogenes FSL N1-017 | NA | NA | NA | food | 393123 | 17311 |
| Listeria monocytogenes J2818 | NA | NA | NA | food | 393131 | 17327 |
| Streptococcus canis FSL Z3-227 | NA | NA | NA | food | 482234 | 21075 |
| Listeria monocytogenes J0161, FSL R2-499 | NA | NA | NA | food | 393130 | 17493 |
| Salmonella enterica SL486 SL480 (DBS_GA_F25499) | NA | NA | NA | food | 454165 | 20071 |
| Leuconostoc gasicomitatum | NA | NA | NA | food | 115778 | 15732 |
| Salmonella enterica CVM23701, S4,[5],12:i: | NA | NA | NA | food | 440534 | 19465 |
| Clostridium botulinum Iwanei E | NA | NA | NA | food | 445338 | 20019 |
| Lactobacillus delbrueckii ATCC11842 | NA | NA | NA | food | 390333 | 16871 |
| Listeria monocytogenes H7858 (meat isolate) | NA | NA | NA | food | 267410 | 10752 |
| Lactococcus lactis SK11 | NA | NA | NA | food | 272622 | 401 |
| Lactobacillus sakei 23K | NA | NA | NA | food | 314315 | 13435 |
| Clostridium botulinum NCTC 2916 | NA | NA | NA | food | 445335 | 20013 |
| Lactococcus lactis MG1363 | NA | NA | NA | food | 416870 | 18797 |
| Salmonella enterica SL483 | NA | NA | NA | food | 454166 | 20063 |
| Clostridium botulinum Bf | NA | NA | NA | food | 445336 | 20015 |
| Clostridium botulinum Alaska E43 | NA | NA | NA | food | 508767 | 28855 |
| Leuconostoc citreum KM20 | NA | NA | NA | food | 349519 | 16062 |
| Bacillus cereus m1293 | NA | NA | NA | food | 526973 | 29657 |
| Bacillus cereus MM3 | NA | NA | NA | food | 526971 | 29653 |
| Lactobacillus casei Zhang | NA | NA | NA | food | 498216 | 28537 |
| Salmonella enterica SARA29 | NA | NA | NA | food | 439847 | 19463 |
| Propionibacterium freudenreichii CIP 103027 | NA | NA | NA | food | 380773 | 16705 |
| Bacillus cereus mm1550 | NA | NA | NA | food | 526969 | 29649 |
| Aeromonas hydrophila ATCC7966 | NA | NA | NA | food | 380703 | 16697 |
| Cronobacter enterobacter sakazakii ATCC BAA-894 | NA | NA | NA | food | 290339 | 12720 |
| Clostridium botulinum Langeland | NA | NA | NA | food | 441772 | 19519 |
| Salmonella enterica CT_02021853 | NA | NA | NA | food | 439851 | 19467 |
| Brucella abortus S19 | NA | NA | NA | food | 430066 | 18999 |
| Clostridium botulinum BoNT/A3 Loch Maree | NA | NA | NA | food | 498214 | 28507 |
| Streptococcus thermophilus LMG18311 | NA | NA | NA | food | 264199 | 13162 |
| Leuconostoc mesenteroides ATCC 8293 | NA | NA | NA | food | 203120 | 315 |
| Gluconobacter oxydans 621H | NA | NA | NA | food | 290633 | 13325 |
| Brevibacterium linens BL2 | NA | NA | NA | food | 321955 | 405 |
| Bacillus cereus NVH0597-99 | NA | NA | NA | food | 451707 | 19955 |
| Lactococcus lactis IL1403 | NA | NA | NA | food | 272623 | 72 |
| Salmonella enterica CDC 191 | NA | NA | NA | food | 454231 | 20069 |
| Clostridium botulinum type C - Eklund | NA | NA | NA | food | 445337 | 20017 |
| Listeria monocytogenes F6854, frankfurter isolate | NA | NA | NA | food | 267409 | 10753 |
| Listeria monocytogenes FSL F2-515 | NA | NA | NA | food | 393116 | 17297 |
| Salmonella enterica SL486, CVM30485 | NA | NA | NA | food | 454164 | 20065 |
| Streptococcus thermophilus CNRZ 1066 | NA | NA | NA | food | 299768 | 13163 |
| Streptococcus thermophilus LMD-9 | NA | NA | NA | food | 322159 | 13773 |
| Salmonella enterica SL476, CVM30485 | NA | NA | NA | food | 454169 | 20045 |
| Salmonella enterica CVM29188 | NA | NA | NA | food | 439842 | 19457 |
| Salmonella enterica SL317 | NA | NA | NA | food | 454168 | 20047 |
| Listeria monocytogenes FSL J2-064 | NA | NA | NA | food | 393122 | 17309 |
| Salmonella enterica CVM19633 | NA | NA | NA | food | 439843 | 19459 |
| Bacillus cereus ATCC 10987 | NA | NA | NA | food | 222523 | 74 |
| Salmonella enterica SARA23 | NA | NA | NA | food | 439846 | 19461 |
| Clostridium botulinum Kyoto-F | NA | NA | NA | food | 536232 | 29859 |
| Salmonella enterica GA_MM04042433 | NA | NA | NA | food | 454167 | 20049 |
| Listeria monocytogenes F6900 | NA | NA | NA | food | 393128 | 17321 |
| Clostridium botulinum BoNT E Beluga | NA | NA | NA | food | 536233 | 29861 |
| Escherichia coli TW14359 | NA | NA | NA | food | 544404 | 30045 |
| Clostridium botulinum type A - Hall | NA | NA | NA | food | 413999 | 193 |
| Macrococcus caseolyticus JCSC5402 | NA | NA | NA | food | 458233 | 20209 |
| Zymomonas mobilis ZM4 | NA | NA | NA | food | 264203 | 12354 |
| Campylobacter jejuni RM1221 | NA | NA | NA | food | 195099 | 303 |
| Listeria monocytogenes XFL0605 | NA | NA | NA | food | 447719 | 19793 |
| Clostridium botulinum BoNT/B1 Okra | NA | NA | NA | food | 498213 | 28505 |
