<?xml version="1.0" encoding="UTF-8"?>
<NasReports xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
 xsi:schemaLocation="http://gensc.org/gcdml ../../base/gcdml.xsd"
 xmlns="http://gensc.org/gcdml"
 xmlns:gml="http://www.opengis.net/gml">
    <MIGSReports>
        <virus gcatID="not assigned" sourceName="not assigned" sourceVersion="1">
            <ncbiOrganismName>Listonella phage phiHSIC</ncbiOrganismName>
            <ncbiTaxID>310539</ncbiTaxID>
            <genomeProjectID>15173</genomeProjectID>
           
            <originalSample>
                <physicalMaterial>
                    <samplingTime>
                        <interval>
                            <start>1994-02-14</start>
                            <stop>1994-02-17</stop>
                        </interval>
                    </samplingTime>
                    <Location>
                        <name>Ke'ehi Lagoon, Mamala Bay, Hawaii, USA</name>
                        <lat>21.3189</lat>
                        <lon>-157.9047</lon><!-- manually determined coords -->
                    </Location>
                    <amount><measure uom="l" values="20"/>
                    </amount>
                                
                    <habitat>
                        <aquatic habitatDesc="marine">
                        <waterBody>
                            <depth><measure uom="m" values="0"/></depth><!-- surface -->
                        </waterBody>
                        </aquatic>
                      </habitat>
                </physicalMaterial>
            </originalSample> 
            
            <isolate>
                <isolationConditions><pmid>9464390</pmid>
                </isolationConditions>
                <cultureCollection>
                    <na>not deposited</na>
                </cultureCollection>
                <subspecificGeneticLineage>inapplicable</subspecificGeneticLineage>
                <numReplicons>1</numReplicons>
                <originalHost><ncbiTaxid>28169</ncbiTaxid>
                    <specificHostClass>environmental source</specificHostClass>
                    <healthDiseaseStatus>inapplicable</healthDiseaseStatus>
                </originalHost>
                <pathogenicity>bacteria</pathogenicity>
                <propagation>lysogenic</propagation>
               <encodedTraits>DNA polymerase</encodedTraits>
            </isolate>
            <nucExtract><method>Wheatcroft and Williams</method></nucExtract>            
            <sequencing>
                <sequencingMethod>dideoxysequencing</sequencingMethod>
                <assembly>placeholder</assembly><!-- assembly via Sequencher 3.0 -->
                <sops/>
                <link/>
            </sequencing>
        </virus>
        
    </MIGSReports> 
    
        <GCDReports>
        <virus gcatID="not assigned" sourceName="www.megx.net/user/mduhaime" sourceVersion="1">
            <ncbiOrganismName>Listonella phage phiHSIC</ncbiOrganismName>
            <ncbiTaxID>310539</ncbiTaxID>
            <genomeProjectID>15173</genomeProjectID>            

            <originalSample>
                <physicalMaterial>
                    <samplingTime>
                        <interval>
                            <start>1994-02-14</start>
                            <stop>1994-02-17</stop>
                        </interval>
                    </samplingTime>
                    <Location>
                        <name>Ke'ehi Lagoon, Mamala Bay, Hawaii, USA</name>
                        <lat>21.3189</lat>
                        <lon>-157.9047</lon><!-- manually determined coords -->
                    <extension><samplePointLocation>
                        <pos2D>21.3189 -157.9047</pos2D>
                        <determinationMethod>manual calculation based on sample location discription</determinationMethod>
                    </samplePointLocation></extension>
                    </Location>
                    <amount uom="l" values="20"/>
                    
                    <materialType/>
                    <habitat>
                        <aquatic>
                            <waterBody>
                                <depth comment="surface" uom="m" values="0"/><!-- surface -->
                                <temperature uom="C" values="23.94" comment="megx.net WOA05 data interpolation: monthly average"/>
                                <salinity uom="PSU" values="34.99" comment="megx.net WOA05 data interpolation: monthly average"/>
                                <nitrate uom="micromol/l" values="0" comment="megx.net WOA05 data interpolation: monthly average"/>
                                <dissolvedOxygen uom="ml/l" values="4.97" comment="megx.net WOA05 data interpolation: monthly average"/>
                                <phosphate uom="micromol/l" values="0.09" comment="megx.net WOA05 data interpolation: monthly average"/>
                                <anyParameter name="silicate" uom="micromol/l" values="1.6" comment="megx.net WOA05 data interpolation: monthly average"/>                                
                            </waterBody>
                        </aquatic>
                    </habitat>
                </physicalMaterial>
            </originalSample>
            <isolate>
                    <isolationConditions><pmid>9464390</pmid>
                </isolationConditions>
                <cultureCollection>
                    <na>not deposited</na>
                </cultureCollection>
                <subspecificGeneticLineage>inapplicable</subspecificGeneticLineage>
                <originalHost><ncbiTaxid>28169</ncbiTaxid>
                    <specificHostClass>environmental source</specificHostClass>
                    <healthDiseaseStatus>inapplicable</healthDiseaseStatus>
                </originalHost>
                <pathogenicity>bacteria</pathogenicity>
                <propagation>lysogenic</propagation>
               <encodedTraits>DNA polymerase</encodedTraits>
            </isolate>
            <nucExtract>
                <method>Wheatcroft and Williams</method>
                <litReference>
                <doi>10.1128/AEM.71.6.3311-3320.2005</doi>    
                </litReference>
            </nucExtract>
            <sequencing>
                <complete sequencingMethods="dideoxysequencing">
                    <segment label="" size="37966" gc="42" sequencingMethods="dideoxysequencing">
                        <accession>AY772740</accession>
                        <assembly>
                            <assemblyMethod>placeholder</assemblyMethod><!-- assembly via Sequencher 3.0 -->
                            <estimatedErrorRate>missing</estimatedErrorRate>
                        </assembly>
                    </segment>
                </complete>
            </sequencing>
        </virus>
    </GCDReports>
    
    </NasReports>